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Crystal structure of the major cat allergen Fel d 1 (1+2)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 295 22.5% PEG3350, 0.5 M CaCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2 37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.588 α = 70.8 b = 42.996 β = 80.56 c = 48.906 γ = 81.53
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD ADSC QUANTUM 4 2004-10-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 1.087 MAX II I711
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.64 36.51 135810 31695 1680 92.93 0.19224 0.19224 0.19072 0.2003 0.21994 0.2252 RANDOM 17.241
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 -0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.812 r_scangle_it 5.361 r_scbond_it 3.27 r_mcangle_it 1.984 r_angle_refined_deg 1.967 r_mcbond_it 1.168 r_angle_other_deg 1.153 r_symmetry_hbond_refined 0.33 r_symmetry_vdw_other 0.27 r_xyhbond_nbd_refined 0.255
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.812 r_scangle_it 5.361 r_scbond_it 3.27 r_mcangle_it 1.984 r_angle_refined_deg 1.967 r_mcbond_it 1.168 r_angle_other_deg 1.153 r_symmetry_hbond_refined 0.33 r_symmetry_vdw_other 0.27 r_xyhbond_nbd_refined 0.255 r_nbd_refined 0.243 r_nbd_other 0.238 r_chiral_restr 0.204 r_symmetry_vdw_refined 0.148 r_nbtor_other 0.088 r_bond_refined_d 0.021 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2254 Nucleic Acid Atoms Solvent Atoms 241 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling MOLREP phasing