Experiment: 1YYB

Solution structure of 1-26 fragment of human programmed cell death 5 protein

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D_15N NOESY-HSQC; 3D_15N TOCSY-HSQC; 2D_15N HSQC	2-4mM PDCD5(1-26)-15N labeled; 50mM Phosphate buffer, 200mM NaCl, DSS, NaN3; 90% H2O, 10% D2O	90% H2O/10% D2O	0.25	6.5	ambient	298
2	2D_13C HMQC; HMQC-NOESY; HMQC-TOCSY	2mM PDCD5(1-26)-13C labeled; 50mM Phosphate buffer, 200mM NaCl, DSS, NaN3; 100% D2O	100% D2O	0.25	6.5	ambient	298
3	2D TOCSY; 2D NOESY	2-4mM unlabeled PDCD5(1-26); 50mM Phosphate buffer, 200mM NaCl, DSS, NaN3; 90% H2O, 10% D2O	90% H2O/10% D2O	0.25	6.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DMX	600

NMR Refinement
Method	Details	Software
torsion angle dynamics	The structures are based on a total of 223 intraredidual,sequential and medium range NOE restraints, and 19 phi and 19 psi dihedral angle restraints driving from programe TALOS.	XwinNMR

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	50
Conformers Submitted Total Number	20
Representative Model	4 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	XwinNMR	3.5	Bruker
2	data analysis	Felix	98	MSI
3	structure solution	CNS	1.1	Brunger
4	refinement	CNS	1.1	Brunger