1YYB

Solution structure of 1-26 fragment of human programmed cell death 5 protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1yyba1	Peptides	Programmed cell death protein 5 fragments	Programmed cell death protein 5 fragments	Programmed cell death protein 5 fragments	Programmed cell death protein 5 fragments	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Programmed cell death protein 5	DNA binding binding organic cyclic compound binding nucleic acid binding enzyme regulator activity enzyme activator activity molecular function activator activity acetyltransferase activator activity molecular function regulator activity cytoskeletal protein binding beta-tubulin binding protein binding tubulin binding heparin binding DNA binding binding organic cyclic compound binding nucleic acid binding enzyme regulator activity enzyme activator activity molecular function activator activity acetyltransferase activator activity molecular function regulator activity cytoskeletal protein binding beta-tubulin binding protein binding tubulin binding heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	negative regulation of cell population proliferation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation negative regulation of cellular process biological regulation negative regulation of biological process cellular process cellular response to endogenous stimulus cellular response to growth factor stimulus response to stimulus response to transforming growth factor beta cellular response to transforming growth factor beta stimulus negative regulation of cell population proliferation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation negative regulation of cellular process biological regulation negative regulation of biological process cellular process cellular response to endogenous stimulus cellular response to growth factor stimulus response to stimulus response to transforming growth factor beta cellular response to transforming growth factor beta stimulus response to endogenous stimulus response to growth factor cellular response to stimulus positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization signaling apoptotic mitochondrial changes positive regulation of biological process regulation of release of cytochrome c from mitochondria cell communication cellular component organization positive regulation of release of cytochrome c from mitochondria cellular component organization or biogenesis signal transduction positive regulation of cellular process mitochondrion organization cell death regulation of organelle organization apoptotic signaling pathway release of cytochrome c from mitochondria organelle organization regulation of mitochondrion organization apoptotic process programmed cell death cellular biosynthetic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular biosynthetic process protein localization regulation of protein insertion into mitochondrial outer membrane regulation of localization establishment of protein localization nitrogen compound transport protein targeting regulation of protein targeting to mitochondrion positive regulation of establishment of protein localization localization cellular macromolecule localization establishment of localization in cell regulation of intracellular transport establishment of protein localization to membrane positive regulation of protein localization to membrane intracellular transport localization within membrane protein localization to membrane establishment of localization regulation of establishment of protein localization to mitochondrion establishment of protein localization to organelle regulation of protein targeting positive regulation of protein localization protein localization to mitochondrion regulation of intracellular protein transport protein targeting to mitochondrion positive regulation of intracellular protein transport establishment of protein localization to mitochondrion intracellular protein transport cellular localization regulation of protein localization transport establishment of protein localization to mitochondrial membrane positive regulation of protein transport mitochondrial membrane organization outer mitochondrial membrane organization positive regulation of intracellular transport positive regulation of protein targeting to mitochondrion regulation of protein localization to membrane mitochondrial transport positive regulation of protein insertion into mitochondrial outer membrane membrane organization regulation of transport protein insertion into mitochondrial outer membrane regulation of establishment of protein localization regulation of protein transport positive regulation of transport protein transport regulation of cellular localization macromolecule localization protein localization to organelle positive regulation of establishment of protein localization to mitochondrion positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death positive regulation of apoptotic process protein maturation regulation of chaperone-mediated protein folding protein metabolic process organonitrogen compound metabolic process primary metabolic process chaperone-mediated protein folding protein folding regulation of protein folding negative regulation of protein folding negative regulation of chaperone-mediated protein folding regulation of catalytic activity positive regulation of protein metabolic process positive regulation of peptidase activity positive regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of primary metabolic process positive regulation of molecular function regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of proteolysis proteolysis regulation of endopeptidase activity regulation of cysteine-type endopeptidase activity regulation of protein metabolic process regulation of peptidase activity positive regulation of catalytic activity regulation of molecular function positive regulation of hydrolase activity positive regulation of cysteine-type endopeptidase activity regulation of hydrolase activity positive regulation of endopeptidase activity positive regulation of proteolysis	extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cellular anatomical entity vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cellular anatomical entity vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036883	PDCD5-like superfamily	Homologous Superfamily
A	IPR002836	PDCD5-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.