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Major Tropism Determinant P1 Variant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 298 PEG 550 MME, HEPES, calcium chloride, pH 7.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.1 60.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.258 α = 90 b = 92.258 β = 90 c = 102.231 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH 2 1 x-ray 100 M MAD 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 1.1055 APS 19-ID 2 SYNCHROTRON APS BEAMLINE 19-ID 0.97910, 0.97932, 0.95372 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.56 50 98.6 69212 69212 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 1.56 1.62 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.56 20.33 69212 69212 3496 98.59 0.12843 0.12843 0.12755 0.1419 0.14478 0.1572 RANDOM 8.629
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.589 r_dihedral_angle_4_deg 18.169 r_dihedral_angle_3_deg 10.363 r_dihedral_angle_1_deg 6.301 r_scangle_it 2.447 r_scbond_it 1.791 r_angle_refined_deg 1.229 r_mcangle_it 1.081 r_angle_other_deg 0.765 r_mcbond_it 0.689
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.589 r_dihedral_angle_4_deg 18.169 r_dihedral_angle_3_deg 10.363 r_dihedral_angle_1_deg 6.301 r_scangle_it 2.447 r_scbond_it 1.791 r_angle_refined_deg 1.229 r_mcangle_it 1.081 r_angle_other_deg 0.765 r_mcbond_it 0.689 r_symmetry_vdw_other 0.212 r_nbd_refined 0.206 r_symmetry_vdw_refined 0.202 r_nbd_other 0.187 r_nbtor_refined 0.183 r_symmetry_hbond_refined 0.156 r_mcbond_other 0.156 r_metal_ion_refined 0.115 r_symmetry_metal_ion_refined 0.115 r_xyhbond_nbd_refined 0.103 r_nbtor_other 0.084 r_chiral_restr 0.074 r_bond_refined_d 0.009 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2758 Nucleic Acid Atoms Solvent Atoms 488 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling AMoRE phasing