X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5295PEG MME 2000, sodium acetate, ammonium sulfate, strontium chloride, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K
Crystal Properties
Matthews coefficientSolvent content
2.2945.81

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 43.163α = 99.44
b = 52.501β = 106.58
c = 77.925γ = 99.89
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42002-10-12MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X250.98, 0.9794, 0.9790, 0.9687NSLSX25

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.772.695.10.05714.33.56563216.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.7679.20.2383.52.35489

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.772.556563262309332395.110.15910.15910.157360.19087RANDOM19.001
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.120.33-0.050.09-0.24-0.2
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.464
r_scangle_it4.872
r_scbond_it2.946
r_mcangle_it1.902
r_angle_refined_deg1.532
r_mcbond_it1.045
r_nbd_refined0.206
r_symmetry_hbond_refined0.184
r_symmetry_vdw_refined0.172
r_xyhbond_nbd_refined0.153
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.464
r_scangle_it4.872
r_scbond_it2.946
r_mcangle_it1.902
r_angle_refined_deg1.532
r_mcbond_it1.045
r_nbd_refined0.206
r_symmetry_hbond_refined0.184
r_symmetry_vdw_refined0.172
r_xyhbond_nbd_refined0.153
r_chiral_restr0.118
r_bond_refined_d0.016
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4998
Nucleic Acid Atoms
Solvent Atoms525
Heterogen Atoms74

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing