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Solution structure of DNA containing CPD opposited by GA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1mM DNA, 20mM phosphate buffer 90% H2O/10% D2O 100mM NaCl 7.0 ambient 277 2 2D NOESY 1mM DNA, 20mM phosphate buffer 99.9% D2O 100mM NaCl 7.0 ambient 300 3 2D NOESY 1mM DNA, 20mM phosphate buffer 99.9% D2O 100mM NaCl 7.0 ambient 290 4 DQF-COSY 1mM DNA, 20mM phosphate buffer 99.9% D2O 100mM NaCl 7.0 ambient 290
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with acceptable covalent geometry Conformers Calculated Total Number 50 Conformers Submitted Total Number 16 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Frank Delaglio 2 structure solution X-PLOR 3.1 Brunger 3 data analysis Sparky 3.106 T. D. Goddard 4 refinement X-PLOR 3.1 Brunger