1P5V

X-ray structure of the Caf1M:Caf1 chaperone:subunit preassembly complex


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.5293PEG 4000, Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.0539.9

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 36α = 90
b = 69.23β = 92.96
c = 69.11γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42001-06-30MSINGLE WAVELENGTH
21x-ray100CCDADSC QUANTUM 42001-12-06MMAD
31x-ray100CCDADSC QUANTUM 42001-11-16MMAD
41x-ray100CCDMARRESEARCH2002-03-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-20.933ESRFID14-2
2SYNCHROTRONESRF BEAMLINE ID14-40.9798, 0.9801ESRFID14-4
3SYNCHROTRONESRF BEAMLINE ID290.9798, 0.9801ESRFID29
4SYNCHROTRONMAX II BEAMLINE I7111.076MAX III711

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,2,3,41.72090.50.07720.93.3341223412220.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.7569.50.7911.62587

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.72034122323861711910.2010.2010.1980.244RANDOM13.07
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.980.37-1.850.9
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.518
r_scangle_it4.621
r_scbond_it3.034
r_angle_refined_deg2.218
r_mcangle_it2.171
r_mcbond_it1.324
r_angle_other_deg0.984
r_symmetry_vdw_other0.343
r_symmetry_vdw_refined0.263
r_nbd_other0.257
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.518
r_scangle_it4.621
r_scbond_it3.034
r_angle_refined_deg2.218
r_mcangle_it2.171
r_mcbond_it1.324
r_angle_other_deg0.984
r_symmetry_vdw_other0.343
r_symmetry_vdw_refined0.263
r_nbd_other0.257
r_nbd_refined0.255
r_symmetry_hbond_refined0.217
r_chiral_restr0.15
r_xyhbond_nbd_refined0.143
r_nbtor_other0.095
r_bond_refined_d0.027
r_gen_planes_refined0.01
r_bond_other_d0.003
r_gen_planes_other0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2512
Nucleic Acid Atoms
Solvent Atoms138
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
SHARPphasing
REFMACrefinement
CCP4data scaling