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X-ray structure of the Caf1M:Caf1 chaperone:subunit preassembly complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 PEG 4000, Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.05 39.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 36 α = 90 b = 69.23 β = 92.96 c = 69.11 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2001-06-30 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 4 2001-12-06 M MAD 3 1 x-ray 100 CCD ADSC QUANTUM 4 2001-11-16 M MAD 4 1 x-ray 100 CCD MARRESEARCH 2002-03-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.933 ESRF ID14-2 2 SYNCHROTRON ESRF BEAMLINE ID14-4 0.9798, 0.9801 ESRF ID14-4 3 SYNCHROTRON ESRF BEAMLINE ID29 0.9798, 0.9801 ESRF ID29 4 SYNCHROTRON MAX II BEAMLINE I711 1.076 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3,4 1.7 20 90.5 0.077 20.9 3.3 34122 34122 20.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.7 1.75 69.5 0.791 1.6 2587
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.7 20 34122 32386 1711 91 0.201 0.201 0.198 0.244 RANDOM 13.07
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.98 0.37 -1.85 0.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.518 r_scangle_it 4.621 r_scbond_it 3.034 r_angle_refined_deg 2.218 r_mcangle_it 2.171 r_mcbond_it 1.324 r_angle_other_deg 0.984 r_symmetry_vdw_other 0.343 r_symmetry_vdw_refined 0.263 r_nbd_other 0.257
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.518 r_scangle_it 4.621 r_scbond_it 3.034 r_angle_refined_deg 2.218 r_mcangle_it 2.171 r_mcbond_it 1.324 r_angle_other_deg 0.984 r_symmetry_vdw_other 0.343 r_symmetry_vdw_refined 0.263 r_nbd_other 0.257 r_nbd_refined 0.255 r_symmetry_hbond_refined 0.217 r_chiral_restr 0.15 r_xyhbond_nbd_refined 0.143 r_nbtor_other 0.095 r_bond_refined_d 0.027 r_gen_planes_refined 0.01 r_bond_other_d 0.003 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2512 Nucleic Acid Atoms Solvent Atoms 138 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHARP phasing REFMAC refinement CCP4 data scaling