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Solution NMR structure of domain 1 of receptor associated protein
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
3D_15N-separated_NOESY
~1.2 mM 15N/13C isotope labeled D1 of RAP in a 50 mM NaCl, 75 mM NaPi, pH 6.5
95% H2O and 5% D2O
50 mM NaCl, 75 mM NaPi
6.5
ambient
303.5
2
4D_13C/15N-separated_NOESY
~1.2 mM 15N/13C isotope labeled D1 of RAP in a 50 mM NaCl, 75 mM NaPi, pH 6.5
95% H2O and 5% D2O
50 mM NaCl, 75 mM NaPi
6.5
ambient
303.5
3
3D_13C-separated_NOESY
~1.2 mM 15N/13C isotpe-labeled D1 of RAP in a 50 mM NaCl, 75 mM NaPi, pH 6.5
99.99% D2O
4
HNHA
~1.2 mM 15N/13C isotope labeled D1 of RAP in a 50 mM NaCl, 75 mM NaPi, pH 6.5
95% H2O and 5% D2O
50 mM NaCl, 75 mM NaPi
6.5
ambient
303.5
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
INOVA
500
2
Varian
INOVA
600
3
Varian
INOVA
800
NMR Refinement
Method
Details
Software
torsion angle dynamics and simulated annealing protocol
nih-xplor
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number
1
Additional NMR Experimental Information
Details
The structure was determined using multi-dimensionm hetero-nuclear NMR spectroscopy. The constraints consists of NOE, dihedral, J-coupling, chemical shift, conformational database as well as two sets of dipolar couplings measured from two different alignment media.
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
refinement
nih-xplor
1.0.6
~1.2 mM D1 of RAP in a 50 mM~1.2 mM D1 ~1.2 mM D1 of RAP inSchwieters, C. D., Kuszewski, J., Tjandra, N. and Clore, G. M.
2
processing
NMRPipe
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J. and Bax, A.
3
data analysis
NMRPipe
Garrett, D. S., Powers, R., Gronenborn, A. M. and Clore, G. M.