1OKF
NMR structure of an alpha-L-LNA:RNA hybrid
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 3 MM NUCLEIC ACID, 100 MM NACL, 10 MM PHOSPHATE BUFFER | 100 MM NACL | 7.0 | 1 atm | 298 | ||
2 | COSY | 3 MM NUCLEIC ACID, 100 MM NACL, 10 MM PHOSPHATE BUFFER | 100 MM NACL | 7.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE | Amber |
NMR Ensemble Information | |
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Conformer Selection Criteria | |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 20 |
Representative Model | 16 (n/a) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING 1H,1H-NOES FROM NOESY AND WATERGATE NOESY EXPERIMENTS |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | Amber | PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON, SEIBEL,SINGH,WEINER,KOLLMAN | |
2 | structure solution | Felix | ||
3 | structure solution | Amber |