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Solution structure of termicin, an antimicrobial peptide from the termite Pseudacanthotermes spiniger
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
2D NOESY
2mM Termicin; 90% H2O, 10% D2O
90% H2O/10% D2O
3.9
ambient
300
2
2D TOCSY
2mM Termicin; 90% H2O, 10% D2O
90% H2O/10% D2O
3.9
ambient
300
3
DQF-COSY
2mM Termicin; 90% H2O, 10% D2O
90% H2O/10% D2O
3.9
ambient
300
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
INOVA
600
NMR Refinement
Method
Details
Software
molecular dynamics
the structures are based on a total of 834 restraints, 796 NOE-derived
distance constraints, 26 dihedral angle restraints, 12 distance restraints
from hydrogen bonds.
VNMR
NMR Ensemble Information
Conformer Selection Criteria
structures with the least restraint violations, structures with the lowest energy
Conformers Calculated Total Number
50
Conformers Submitted Total Number
20
Representative Model
1 (lowest energy)
Additional NMR Experimental Information
Details
This structure was determined using standard 2D homonuclear techniques.