1JC2
COMPLEX OF THE C-DOMAIN OF TROPONIN C WITH RESIDUES 1-40 OF TROPONIN I
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | ~1.3 mM C-domain of Sqeletal Troponin C, 1.9 mM of TnI peptide (residues 1-40), 100 mM KCl, 10 mM Imidazole, 1 mM DSS | 90% H2O/10% D2O | 0.1 | 6.8 | ambiant | 303 | |
2 | 3D_13C-separated_NOESY | ~1.3 mM C-domain of Sqeletal Troponin C, 1.9 mM of TnI peptide (residues 1-40), 100 mM KCl, 10 mM Imidazole, 1 mM DSS | 90% H2O/10% D2O | 0.1 | 6.8 | ambiant | 303 | |
3 | HNHA | ~1.3 mM C-domain of Sqeletal Troponin C, 1.9 mM of TnI peptide (residues 1-40), 100 mM KCl, 10 mM Imidazole, 1 mM DSS | 90% H2O/10% D2O | 0.1 | 6.8 | ambiant | 303 | |
4 | HNHB | ~1.3 mM C-domain of Sqeletal Troponin C, 1.9 mM of TnI peptide (residues 1-40), 100 mM KCl, 10 mM Imidazole, 1 mM DSS | 90% H2O/10% D2O | 0.1 | 6.8 | ambiant | 303 | |
5 | HNCACB | ~1.3 mM C-domain of Sqeletal Troponin C, 1.9 mM of TnI peptide (residues 1-40), 100 mM KCl, 10 mM Imidazole, 1 mM DSS | 90% H2O/10% D2O | 0.1 | 6.8 | ambiant | 303 | |
6 | CBCACONNH | ~1.3 mM C-domain of Sqeletal Troponin C, 1.9 mM of TnI peptide (residues 1-40), 100 mM KCl, 10 mM Imidazole, 1 mM DSS | 90% H2O/10% D2O | 0.1 | 6.8 | ambiant | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | UNITY | 600 |
3 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
simmulated annealing | ~880 NOE restraints were used, as well as a 86 dihedral restraints. The CA and CB chemical shifts of residues located in well-defined regions were also used to refine the structures | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 30 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | proton-proton NOEs between the TnI peptide and the C-domain of Troponin C were observed but could not be assigned |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | Brunger, A. |
2 | processing | NMRPipe | 1.8 Rev 2000.081.21.00 | Delaglio, F. |
3 | data analysis | NMRView | 4.0.3 | Johnson, B. |
4 | data analysis | PIPP | 4.2 | Delaglio, F. |