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CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G10A MUTANT
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5RXN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 PROTEIN WAS CRYSTALLISED FROM 50-60% SATURATED AMMONIUM SULFATE IN SODIUM
ACETATE BUFFER (50 MM) AT PH 4.6.
Crystal Properties Matthews coefficient Solvent content 2.44 49.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.27 α = 90 b = 64.27 β = 90 c = 32.92 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE RIGAKU RU200 MIRRORS 1996-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 30 94.5 0.08 12.5 3.3 6061 15.74
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.5 1.55 58.8 0.245 2.2 1.5
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER 5RXN 1.5 30 7662 383 94.5 0.171 0.191 RANDOM 19
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 18 p_transverse_tor 14.7 p_scangle_it 4.764 p_planar_tor 4.7 p_scbond_it 3.147 p_mcangle_it 2.377 p_mcbond_it 1.476 p_multtor_nbd 0.245 p_singtor_nbd 0.17 p_planar_d 0.021
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 18 p_transverse_tor 14.7 p_scangle_it 4.764 p_planar_tor 4.7 p_scbond_it 3.147 p_mcangle_it 2.377 p_mcbond_it 1.476 p_multtor_nbd 0.245 p_singtor_nbd 0.17 p_planar_d 0.021 p_angle_d 0.018 p_bond_d 0.015 p_angle_deg p_hb_or_metal_coord p_plane_restr p_chiral_restr p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 423 Nucleic Acid Atoms Solvent Atoms 40 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling