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ACT domain protein from Streptococcus pneumoniae
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 294 0.2 M lithium sulfate, 0.1 M HEPES, 25% PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.1 42.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.253 α = 90 b = 62.024 β = 95.08 c = 38.006 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-2 2005-03-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.97929 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 40 96.7 0.093 30.7 8.4 19284 19284
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.95 73.4 0.756 2.21 5.8 1020
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 40 19273 19273 1966 96.56 0.19102 0.19102 0.1891 0.1897 0.24003 0.2009 RANDOM 25.997
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.31 0.25 -0.07 1.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.742 r_dihedral_angle_4_deg 20.457 r_dihedral_angle_3_deg 15.436 r_dihedral_angle_1_deg 5.621 r_scangle_it 4.774 r_scbond_it 3.047 r_mcangle_it 1.756 r_angle_refined_deg 1.412 r_mcbond_it 0.954 r_nbtor_refined 0.307
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.742 r_dihedral_angle_4_deg 20.457 r_dihedral_angle_3_deg 15.436 r_dihedral_angle_1_deg 5.621 r_scangle_it 4.774 r_scbond_it 3.047 r_mcangle_it 1.756 r_angle_refined_deg 1.412 r_mcbond_it 0.954 r_nbtor_refined 0.307 r_nbd_refined 0.227 r_symmetry_vdw_refined 0.209 r_xyhbond_nbd_refined 0.164 r_symmetry_hbond_refined 0.162 r_chiral_restr 0.098 r_bond_refined_d 0.018 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1964 Nucleic Acid Atoms Solvent Atoms 191 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SHELXD phasing MLPHARE phasing DM phasing SOLVE phasing RESOLVE phasing