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CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 1.0 MM DIMER PROTEIN + 1.5 MM DNA DUPLEX PREPARED. 1.0 MILLILITER (0.1 M MES BUFFER, PH 6.5 + 10 MM MG CL2 + 20 MM NA CL + 20 % PEG 4K) RESERVOIR. HANGING DROP, LINBRO BOX, 20 DEGREE C. WITHIN 5 DAYS, 0.2 X 0.3 X 0.4 MM CRYSTALS., vapor diffusion - hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.1 60
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 121.65 α = 90 b = 121.65 β = 90 c = 39.1 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 IMAGE PLATE RIGAKU RAXIS II MSC/YALE MIRRORS 1996-07-02 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 30 95 0.078 2.9 11024 28.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MULTIPLE ISOMORPHOUS REPLACEMENT THROUGHOUT 2.5 8 10388 1057 91.5 0.208 0.208 0.2029 0.292 0.2705 RANDOM 24.27
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 20.8 x_scangle_it 6.03 x_scbond_it 4.32 x_mcangle_it 3.99 x_mcbond_it 2.63 x_angle_deg 1.753 x_improper_angle_d 1.59 x_bond_d 0.011 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 20.8 x_scangle_it 6.03 x_scbond_it 4.32 x_mcangle_it 3.99 x_mcbond_it 2.63 x_angle_deg 1.753 x_improper_angle_d 1.59 x_bond_d 0.011 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1104 Nucleic Acid Atoms 690 Solvent Atoms 157 Heterogen Atoms 6
Software Software Software Name Purpose PHASES phasing X-PLOR refinement MOSFLM data reduction