1ZEQ

1.5 A Structure of apo-CusF residues 6-88 from Escherichia coli


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.529820% (w/v) PEG, 10% isopropanol, Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
1.8131.95

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 39.3α = 90
b = 39.326β = 90
c = 43.693γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42005-01-28MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X26C0.985NSLSX26C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.55098.90.03974.4910.81122611226
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.51.5593.10.3985.165

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.529.24106461064653898.870.186220.186220.185150.20674RANDOM17.373
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg47.714
r_dihedral_angle_3_deg10.024
r_dihedral_angle_1_deg6.665
r_scangle_it4.858
r_scbond_it3.656
r_mcangle_it2.387
r_mcbond_it2.012
r_angle_refined_deg1.682
r_angle_other_deg0.793
r_dihedral_angle_4_deg0.511
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg47.714
r_dihedral_angle_3_deg10.024
r_dihedral_angle_1_deg6.665
r_scangle_it4.858
r_scbond_it3.656
r_mcangle_it2.387
r_mcbond_it2.012
r_angle_refined_deg1.682
r_angle_other_deg0.793
r_dihedral_angle_4_deg0.511
r_mcbond_other0.405
r_symmetry_vdw_other0.245
r_symmetry_hbond_refined0.235
r_symmetry_vdw_refined0.228
r_nbd_refined0.206
r_xyhbond_nbd_refined0.181
r_nbd_other0.172
r_nbtor_refined0.167
r_chiral_restr0.093
r_nbtor_other0.088
r_bond_refined_d0.018
r_gen_planes_refined0.007
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms669
Nucleic Acid Atoms
Solvent Atoms80
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
CBASSdata collection
SCALEPACKdata scaling
SOLVEphasing