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Structure of Gun4 from Thermosynechococcus elongatus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277 20% PEG 3350, 0.2 M NH3Cl, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.5 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.295 α = 90 b = 40.672 β = 115.4 c = 62.372 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2004-02-04 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS 0.976, 0.9802, 0.9660 NSLS
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 50 0.068 42484 42482
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.5 1.539 100 0.467
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.5 50 40305 2141 99.68 0.18042 0.1789 0.1805 0.20856 RANDOM 16.161
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.5 -0.07 -0.32 0.76
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.785 r_dihedral_angle_4_deg 16.165 r_dihedral_angle_3_deg 12.096 r_dihedral_angle_1_deg 5.4 r_scangle_it 2.498 r_scbond_it 1.755 r_mcangle_it 1.181 r_angle_refined_deg 1.117 r_mcbond_it 0.982 r_angle_other_deg 0.825
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.785 r_dihedral_angle_4_deg 16.165 r_dihedral_angle_3_deg 12.096 r_dihedral_angle_1_deg 5.4 r_scangle_it 2.498 r_scbond_it 1.755 r_mcangle_it 1.181 r_angle_refined_deg 1.117 r_mcbond_it 0.982 r_angle_other_deg 0.825 r_symmetry_vdw_other 0.252 r_nbd_refined 0.215 r_nbtor_refined 0.182 r_nbd_other 0.175 r_symmetry_vdw_refined 0.158 r_mcbond_other 0.156 r_symmetry_hbond_refined 0.155 r_xyhbond_nbd_refined 0.151 r_nbtor_other 0.082 r_chiral_restr 0.069 r_bond_refined_d 0.009 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1938 Nucleic Acid Atoms Solvent Atoms 432 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing