1Z2K

NMR structure of the D1 domain of the Natural Killer Cell Receptor, 2B4


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.5mM 2B4 D1 domain, U-15N,13C; 50 mM phosphate buffer; pH 7.2; 90% H2O, 10% D2Oaqueous solution at 298 degrees Kelvin50 mM sodium phosphate7.2ambient298
23D_15N-separated_NOESY0.5mM 2B4 D1 domain, U-15N,13C; 50 mM phosphate buffer; pH 7.2; 90% H2O, 10% D2Oaqueous solution at 298 degrees Kelvin50 mM sodium phosphate7.2ambient298
32D NOESY0.5mM 2B4 D1 domain, U-15N,13C; 50 mM phosphate buffer; pH 7.2; 90% H2O, 10% D2Oaqueous solution at 298 degrees Kelvin50 mM sodium phosphate7.2ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
distance geometry and simulated annealingThe structures are based on a total of 2657 restraints, 2359 are NOE-derived distance constraints, 128 dihedral angle restraints, 170 distance restraints from hydrogen bonds.X-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number25
Conformers Submitted Total Number14
Representative Model7 (closest to the average)
Additional NMR Experimental Information
DetailsThe structure was determinded using standard 2D homonuclear NOESY and 3D heteronuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionX-PLOR3.1Brunger
2collectionXwinNMR2.5Bruker
3refinementX-PLOR3.1Brunger