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Crystal Structure of A. fulgidus Lon proteolytic domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 295 PEG 400,calcium acetate,sodium cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.2 44.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.454 α = 90 b = 86.279 β = 92.3 c = 137.966 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2004-09-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.00 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 50 98.9 22682 22682 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.075 98.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3 15 2 22682 21365 1148 99.13 0.21947 0.21468 0.2155 0.31016 0.3087 RANDOM 18.042
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.92 1.53 -4.05 1.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.016 r_dihedral_angle_3_deg 25.161 r_dihedral_angle_4_deg 21.753 r_dihedral_angle_1_deg 10.725 r_scangle_it 5.376 r_scbond_it 3.716 r_angle_refined_deg 3.281 r_mcangle_it 2.493 r_mcbond_it 1.882 r_symmetry_vdw_refined 0.379
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.016 r_dihedral_angle_3_deg 25.161 r_dihedral_angle_4_deg 21.753 r_dihedral_angle_1_deg 10.725 r_scangle_it 5.376 r_scbond_it 3.716 r_angle_refined_deg 3.281 r_mcangle_it 2.493 r_mcbond_it 1.882 r_symmetry_vdw_refined 0.379 r_nbtor_refined 0.336 r_nbd_refined 0.315 r_chiral_restr 0.208 r_xyhbond_nbd_refined 0.207 r_symmetry_hbond_refined 0.099 r_bond_refined_d 0.041 r_gen_planes_refined 0.012
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8733 Nucleic Acid Atoms Solvent Atoms 503 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MAR345 data collection SCALEPACK data scaling EPMR phasing