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Crystal Structure of A. fulgidus Lon proteolytic domain E506A mutant
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 PEG 400, calcium acetate, sodium cacodylate , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.87 34.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.26 α = 90 b = 83.26 β = 90 c = 41.17 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2005-02-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.000 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 20 99.9 23792 23792 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.55 1.591 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.55 20 2 23792 23477 229 99.73 0.18012 0.17987 0.1805 0.20717 0.2053 RANDOM 34.265
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 0.19 0.37 -0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.487 r_dihedral_angle_4_deg 22.849 r_dihedral_angle_3_deg 15.598 r_scangle_it 6.427 r_dihedral_angle_1_deg 5.231 r_scbond_it 5.059 r_mcangle_it 1.825 r_angle_refined_deg 1.47 r_mcbond_it 1.091 r_nbtor_refined 0.312
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.487 r_dihedral_angle_4_deg 22.849 r_dihedral_angle_3_deg 15.598 r_scangle_it 6.427 r_dihedral_angle_1_deg 5.231 r_scbond_it 5.059 r_mcangle_it 1.825 r_angle_refined_deg 1.47 r_mcbond_it 1.091 r_nbtor_refined 0.312 r_symmetry_hbond_refined 0.252 r_symmetry_vdw_refined 0.222 r_nbd_refined 0.212 r_chiral_restr 0.094 r_metal_ion_refined 0.086 r_bond_refined_d 0.013 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1517 Nucleic Acid Atoms Solvent Atoms 211 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement MAR345 data collection SCALEPACK data scaling AMoRE phasing