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Crystal structure of cytomegalovirus UL44 bound to C-terminal peptide from CMV UL54
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.2 295 2 M ammonium sulfate, 100 mM phosphate-citrate, and 10 mM DTT , pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.8 55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.787 α = 90 b = 127.592 β = 90 c = 65.975 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 CCD SBC-2 2003-08-09 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9793, 0.9794, 1.008, 0.9537 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 30 99.9 0.058 44.8 14.2 13819 13802 -3 53.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.61 100 100 0.203 13.7 1697
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.5 30 13046 687 99.77 0.197 0.197 0.195 0.2091 0.227 0.2334 RANDOM 32.66
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.01 -0.27 -0.74
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 10.784 r_scbond_it 7.746 r_mcangle_it 5.67 r_mcbond_it 3.285 r_angle_refined_deg 1.88 r_symmetry_hbond_refined 0.468 r_dihedral_angle_1_deg 0.349 r_symmetry_vdw_refined 0.251 r_nbd_refined 0.235 r_chiral_restr 0.125
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 10.784 r_scbond_it 7.746 r_mcangle_it 5.67 r_mcbond_it 3.285 r_angle_refined_deg 1.88 r_symmetry_hbond_refined 0.468 r_dihedral_angle_1_deg 0.349 r_symmetry_vdw_refined 0.251 r_nbd_refined 0.235 r_chiral_restr 0.125 r_xyhbond_nbd_refined 0.125 r_bond_refined_d 0.012 r_gen_planes_refined 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2105 Nucleic Acid Atoms Solvent Atoms 48 Heterogen Atoms 32
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement