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Structure of domain of unknown function DUF77 from Bacillus cereus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 298 PEG 3350, Tris-HCL, MgCl2, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.9 35.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.716 α = 90 b = 55.175 β = 120.39 c = 49.875 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 115 CCD CUSTOM-MADE 2004-08-22 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.97931,0.97947 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 43 92.7 18421 18421
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.72 1.79 59.2 0.121 5.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.7 43.03 18420 17475 945 92.76 0.16402 0.16402 0.16204 0.1615 0.20062 0.2006 RANDOM 17.553
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.37 0.16 -0.14 0.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.824 r_dihedral_angle_4_deg 20.673 r_dihedral_angle_3_deg 12.141 r_dihedral_angle_1_deg 6.265 r_scangle_it 3.509 r_scbond_it 2.235 r_angle_refined_deg 1.217 r_mcangle_it 1.194 r_mcbond_it 0.769 r_nbtor_refined 0.301
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.824 r_dihedral_angle_4_deg 20.673 r_dihedral_angle_3_deg 12.141 r_dihedral_angle_1_deg 6.265 r_scangle_it 3.509 r_scbond_it 2.235 r_angle_refined_deg 1.217 r_mcangle_it 1.194 r_mcbond_it 0.769 r_nbtor_refined 0.301 r_nbd_refined 0.189 r_symmetry_vdw_refined 0.187 r_xyhbond_nbd_refined 0.158 r_symmetry_hbond_refined 0.137 r_chiral_restr 0.086 r_bond_refined_d 0.01 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1595 Nucleic Acid Atoms Solvent Atoms 292 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection SCALEPACK data scaling SHELXD phasing MLPHARE phasing ARP/wARP model building