☰ Navigation Tabs
RECOMBINANT YEAST FUMARASE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FUO PDB ENTRY 1FUO
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.3 150 MM TRIS-HCL PH 8.3, 100 MM LI2SO4, 8-10% PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.3 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 95.19 α = 90 b = 95.19 β = 90 c = 100.56 γ = 90
Symmetry Space Group P 42 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 287 AREA DETECTOR SIEMENS 1994-03-17 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.59 10 94.5 0.109 0.154 6.9 7.9 14127 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.59 2.62 67 0.54 0.487 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1FUO 2.6 30 1 14127 2558 60 0.196 0.196 0.3089 0.315 RANDOM 24.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 21.94 x_improper_angle_d 2.5 x_angle_deg 2.4 x_bond_d 0.014 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 21.94 x_improper_angle_d 2.5 x_angle_deg 2.4 x_bond_d 0.014 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot x_mcbond_it x_mcangle_it x_scbond_it x_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3439 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement XENGEN data reduction XENGEN data scaling X-PLOR phasing