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Conserved hypothetical protein Cth-95 from Clostridium thermocellum
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 sitting drop, vapor diffusion 7.6 291 1.5M dipotassium hydrogen phosphate, 0.1M HEPES, pH 7.6, sitting drop, vapor diffusion, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.5 50.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.915 α = 90 b = 55.476 β = 120.84 c = 88.462 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 0.9793 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 50 97 0.083 39625
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.85 1.92 94.8 0.541
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAS THROUGHOUT 1.95 27.735 34080 1054 100 0.229 0.22883 0.2275 0.2354 0.2704 0.2828 thin shells 22.504
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.655 -0.311 0.467 -0.131
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.758 r_dihedral_angle_4_deg 26.603 r_dihedral_angle_3_deg 12.822 r_dihedral_angle_1_deg 6.337 r_scangle_it 3.774 r_angle_other_deg 3.764 r_scbond_it 2.439 r_scangle_other 1.742 r_mcangle_it 1.58 r_angle_refined_deg 1.408
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.758 r_dihedral_angle_4_deg 26.603 r_dihedral_angle_3_deg 12.822 r_dihedral_angle_1_deg 6.337 r_scangle_it 3.774 r_angle_other_deg 3.764 r_scbond_it 2.439 r_scangle_other 1.742 r_mcangle_it 1.58 r_angle_refined_deg 1.408 r_mcbond_it 0.886 r_mcangle_other 0.814 r_nbd_other 0.22 r_symmetry_vdw_other 0.208 r_nbd_refined 0.188 r_symmetry_hbond_refined 0.184 r_nbtor_refined 0.171 r_symmetry_vdw_refined 0.159 r_xyhbond_nbd_refined 0.144 r_nbtor_other 0.113 r_chiral_restr 0.086 r_bond_refined_d 0.015 r_gen_planes_other 0.006 r_gen_planes_refined 0.005 r_bond_other_d r_mcbond_other r_scbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2726 Nucleic Acid Atoms Solvent Atoms 198 Heterogen Atoms 5
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection ARP/wARP model building