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Ferric binding protein from Campylobacter jejuni
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 292.15 PEG 4000, sodium acetate, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 292.15K
Crystal Properties Matthews coefficient Solvent content 1.94 26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.45 α = 90 b = 90.7 β = 92.39 c = 56.83 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2003-08-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU300 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 16.03 93.8 47997 47997
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.86 91.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 16.03 47997 44041 3888 100 0.16695 0.16695 0.16373 0.1747 0.20321 0.2147 RANDOM 15.269
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.45 0.22 0.89 -0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.834 r_scangle_it 3.862 r_scbond_it 2.336 r_mcangle_it 1.353 r_angle_refined_deg 1.315 r_angle_other_deg 0.823 r_mcbond_it 0.714 r_symmetry_vdw_other 0.298 r_symmetry_vdw_refined 0.272 r_nbd_other 0.246
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.834 r_scangle_it 3.862 r_scbond_it 2.336 r_mcangle_it 1.353 r_angle_refined_deg 1.315 r_angle_other_deg 0.823 r_mcbond_it 0.714 r_symmetry_vdw_other 0.298 r_symmetry_vdw_refined 0.272 r_nbd_other 0.246 r_symmetry_hbond_refined 0.223 r_nbd_refined 0.211 r_xyhbond_nbd_refined 0.189 r_chiral_restr 0.085 r_nbtor_other 0.084 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5002 Nucleic Acid Atoms Solvent Atoms 612 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing