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Structure of a hemolysin-coregulated protein from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 295 PEG 3350, HEPES, tri-sodium citrate, Peritone N, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.5 50.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 146.729 α = 90 b = 146.729 β = 90 c = 42.222 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 105 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97943, 0.97956, 0.96863 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 48.03 98.4 37749 37749
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2.04 91.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.95 50 35832 35832 1919 98.39 0.18174 0.18174 0.1794 0.1789 0.22665 0.2266 RANDOM 25.725
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.66 -0.33 -0.66 0.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.829 r_dihedral_angle_4_deg 15.257 r_dihedral_angle_3_deg 12.498 r_dihedral_angle_1_deg 5.912 r_scangle_it 2.569 r_scbond_it 1.695 r_angle_refined_deg 1.15 r_mcangle_it 1.006 r_mcbond_it 0.741 r_nbtor_refined 0.293
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.829 r_dihedral_angle_4_deg 15.257 r_dihedral_angle_3_deg 12.498 r_dihedral_angle_1_deg 5.912 r_scangle_it 2.569 r_scbond_it 1.695 r_angle_refined_deg 1.15 r_mcangle_it 1.006 r_mcbond_it 0.741 r_nbtor_refined 0.293 r_symmetry_vdw_refined 0.181 r_nbd_refined 0.177 r_symmetry_hbond_refined 0.129 r_xyhbond_nbd_refined 0.124 r_chiral_restr 0.079 r_bond_refined_d 0.009 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3609 Nucleic Acid Atoms Solvent Atoms 537 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction HKL-2000 data scaling SOLVE phasing autoSHARP phasing