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Crystal Structure of the putative arsenical resistance operon repressor from Archaeoglobus fulgidus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 295 PEG 3350, sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.96 36.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 36.741 α = 90 b = 43.244 β = 96.13 c = 61.674 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-3 mirrors 2004-07-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.97916 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 61.31 87.9 0.072 11.1 7 25483 22399
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.66 45.9 0.286 4.1 5.2 1156
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.6 61.31 20973 20973 1123 86.5 0.17331 0.17331 0.17172 0.1691 0.20144 0.2001 RANDOM 15.174
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.76 0.76 -0.74 0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.268 r_dihedral_angle_3_deg 13.812 r_dihedral_angle_4_deg 11.144 r_dihedral_angle_1_deg 4.253 r_scangle_it 3.534 r_scbond_it 2.299 r_mcangle_it 1.281 r_angle_refined_deg 1.122 r_mcbond_it 0.958 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.268 r_dihedral_angle_3_deg 13.812 r_dihedral_angle_4_deg 11.144 r_dihedral_angle_1_deg 4.253 r_scangle_it 3.534 r_scbond_it 2.299 r_mcangle_it 1.281 r_angle_refined_deg 1.122 r_mcbond_it 0.958 r_nbtor_refined 0.3 r_symmetry_hbond_refined 0.244 r_symmetry_vdw_refined 0.226 r_nbd_refined 0.203 r_xyhbond_nbd_refined 0.135 r_chiral_restr 0.077 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1459 Nucleic Acid Atoms Solvent Atoms 263 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-2000 data scaling HKL-3000 phasing