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Structure of Rv0793 from Mycobacterium tuberculosis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 295 PEG20K, hepes, ammonium acetate, ethylene glycol, isopropanol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.84 33.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.44 α = 103.44 b = 34.6 β = 107.96 c = 42.85 γ = 94.34
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-09-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 0.979232 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 30 96.9 0.098 0.098 8.5 3.7 20461
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.66 95.4 0.485 0.48 4.8 3.6 2027
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.6 29.59 19610 994 93.11 0.176 0.202 0.173 0.219 0.2104 RANDOM 18.607
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.06 0.07 0.08 -0.04 -0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.008 r_dihedral_angle_4_deg 16.773 r_dihedral_angle_3_deg 12.449 r_dihedral_angle_1_deg 6.17 r_scangle_it 3.033 r_scbond_it 2.027 r_angle_refined_deg 1.219 r_mcangle_it 1.049 r_mcbond_it 0.62 r_nbtor_refined 0.307
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.008 r_dihedral_angle_4_deg 16.773 r_dihedral_angle_3_deg 12.449 r_dihedral_angle_1_deg 6.17 r_scangle_it 3.033 r_scbond_it 2.027 r_angle_refined_deg 1.219 r_mcangle_it 1.049 r_mcbond_it 0.62 r_nbtor_refined 0.307 r_nbd_refined 0.198 r_symmetry_vdw_refined 0.176 r_symmetry_hbond_refined 0.139 r_xyhbond_nbd_refined 0.131 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1549 Nucleic Acid Atoms Solvent Atoms 208 Heterogen Atoms 12
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing REFMAC refinement MOSFLM data reduction