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Human GST A1-1 T68E mutant
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1GSD pdb entry 1gsd
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.8 293 PEG4 000, DTT, Tris-HCl, MPD, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.4 49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.077 α = 90 b = 90.57 β = 93.06 c = 51.489 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-06-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 0.996 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 67 99.9 38714 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.85 1.92 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT pdb entry 1gsd 1.85 67 38714 34854 3860 99.87 0.16944 0.16415 0.174 0.21809 0.2241 RANDOM 22.978
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 1.14 0.4 -0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.668 r_scangle_it 4.01 r_scbond_it 2.443 r_mcangle_it 1.661 r_angle_refined_deg 1.51 r_mcbond_it 0.952 r_angle_other_deg 0.902 r_nbd_other 0.236 r_nbd_refined 0.221 r_symmetry_hbond_refined 0.176
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.668 r_scangle_it 4.01 r_scbond_it 2.443 r_mcangle_it 1.661 r_angle_refined_deg 1.51 r_mcbond_it 0.952 r_angle_other_deg 0.902 r_nbd_other 0.236 r_nbd_refined 0.221 r_symmetry_hbond_refined 0.176 r_xyhbond_nbd_refined 0.159 r_symmetry_vdw_other 0.15 r_symmetry_vdw_refined 0.102 r_chiral_restr 0.096 r_nbtor_other 0.085 r_bond_refined_d 0.016 r_gen_planes_other 0.009 r_gen_planes_refined 0.008 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3574 Nucleic Acid Atoms Solvent Atoms 448 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling CNS phasing