1XRZ
NMR Structure of a Zinc Finger with Cyclohexanylalanine Substituted for the Central Aromatic Residue
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | DQF-COSY | 2mM Zfy-6T[Y10(CHA)], 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM D11-Tris-HCl, 2.2mM ZnCl2 | 6.0 | ambient | 298 | |
2 | DQF-COSY | 2mM Zfy-6T[Y10(CHA)] | 100% D2O | 50mM D11-Tris-HCl, 2.2mM ZnCl2 | 6.0 | ambient | 298 | |
3 | 2D TOCSY | 2mM Zfy-6T[Y10(CHA)], 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM D11-Tris-HCl, 2.2mM ZnCl2 | 6.0 | ambient | 298 | |
4 | 2D TOCSY | 2mM Zfy-6T[Y10(CHA)], 90% H2O, 10% D2O | 90% H2O/10% D2O | |||||
5 | 2D NOESY | 2mM Zfy-6T[Y10(CHA)], 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM D11-Tris-HCl, 2.2mM ZnCl2 | 6.0 | ambient | 298 | |
6 | 2D NOESY | 2mM Zfy-6T[Y10(CHA)], 90% H2O, 10% D2O | 90% H2O/10% D2O |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | VXRS | 500 |
2 | Varian | UNITYPLUS | 500 |
NMR Refinement | ||
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Method | Details | Software |
Distance geometry/simulated annealing followed by restrained molecular dynamics | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 34 |
Representative Model | 1 (fewest violations) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 2D homonuclear techniques. Hydrogen assignments for the cyclohexanyl ring were made by extension from the normal methods. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | VNMR | 4.3 | Varian, Inc. |
2 | processing | VNMR | 5.3 | Varian, Inc. |
3 | structure solution | DGII | Standalone | Havel, T.F. |
4 | refinement | X-PLOR | 3.1 | Brunger |
5 | data analysis | NHFIT | Standalone | Redfield, C. |