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Crystal Structure of MCSG Target APC26283 from Vibrio cholerae
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.6 295 0.2M di-Ammonium Tartrate, 20% w/v PEG 3350, HgCl2, 5% PEG 4000, pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K, pH 6.60
Crystal Properties Matthews coefficient Solvent content 2.7 51.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.729 α = 90 b = 52.888 β = 90.2 c = 72.215 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 99.8 CCD MARRESEARCH MIRROR 2004-08-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 5ID-B APS 5ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 25 1 0.06 18.68 7.44 30494 -3 41.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.27 0.9 0.317 4.98 5.73
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 2.3 25 26111 24796 1315 99.1 0.203 0.201 0.203 0.253 0.246 RANDOM 24.65
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.1 -0.08 4.05 -1.94
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.787 r_scangle_it 1.902 r_angle_refined_deg 1.191 r_scbond_it 1.188 r_mcangle_it 0.751 r_mcbond_it 0.396 r_nbd_refined 0.196 r_symmetry_vdw_refined 0.18 r_xyhbond_nbd_refined 0.153 r_symmetry_hbond_refined 0.103
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.787 r_scangle_it 1.902 r_angle_refined_deg 1.191 r_scbond_it 1.188 r_mcangle_it 0.751 r_mcbond_it 0.396 r_nbd_refined 0.196 r_symmetry_vdw_refined 0.18 r_xyhbond_nbd_refined 0.153 r_symmetry_hbond_refined 0.103 r_chiral_restr 0.087 r_bond_refined_d 0.011 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4054 Nucleic Acid Atoms Solvent Atoms 243 Heterogen Atoms 44
Software Software Software Name Purpose REFMAC refinement MAR345 data collection XDS data scaling SHELXD phasing SHARP phasing