1XOY

Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O90% H2O/10% D2O7.21 atm298.2
23D_13C-separated_NOESY1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O90% H2O/10% D2O7.21 atm298.2
33D HNCACB1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O90% H2O/10% D2O7.21 atm298.2
43D CBCA(CO)NH1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O90% H2O/10% D2O7.21 atm298.2
53D HCCH-TOCSY1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O90% H2O/10% D2O7.21 atm298.2
63D C(CO)NH1 mM U-15N,13C At3g04780.1, 50 mM KH2PO4, 10 mM DTT, 90%H2O, 10%D2O90% H2O/10% D2O7.21 atm298.2
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerDMX500
NMR Refinement
MethodDetailsSoftware
simulated annealing molecular dynamicsVNMR
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1Varian
2collectionXwinNMR2.6Bruker
3processingNMRPipe97.027.12.56Delaglio
4data analysisSparky3.72Goddard T.D., Kneller, D.G.
5structure solutionCYANA1.06Guntert
6refinementXplor-NIH2.9.3Schwieters, et al.