1XOP
NMR structure of G1V mutant of influenza hemagglutinin fusion peptide in DPC micelles at pH 5
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | DQF-COSY | 2 mM peptide in the presence of 200 mM d38-DPC in 0.05% NaN3, 5 mM DTT, 20 mM d4-acetic acid, pH 5 | 95% H2O/5% D2O | 0.02 | 5 | ambient | 303 | |
2 | 2D NOESY | 2 mM peptide in the presence of 200 mM d38-DPC in 0.05% NaN3, 5 mM DTT, 20 mM d4-acetic acid, pH 5 | 95% H2O/5% D2O | 0.02 | 5 | ambient | 303 | |
3 | 2D TOCSY | 2 mM peptide in the presence of 200 mM d38-DPC in 0.05% NaN3, 5 mM DTT, 20 mM d4-acetic acid, pH 5 | 95% H2O/5% D2O | 0.02 | 5 | ambient | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
2 | Varian | UNITYPLUS | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | DYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 25 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
---|---|
Details | This sturcture was determined using standard 2D homonuclear techniques. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | DYANA | 1.5 | Guntert, P. |
2 | refinement | OPAL | 2.6 | Luginbulh, P. |