1XMW
CD3 EPSILON AND DELTA ECTODOMAIN FRAGMENT COMPLEX IN SINGLE-CHAIN CONSTRUCT
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | HNCA | 0.5mM, U-15N,13C,2D | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
2 | HN(CO)CA | 0.5mM, U-15N,13C,2D | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
3 | HN(CA)CB | 0.5mM, U-15N,13C,2D | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
4 | HN(COCA)CB | 0.5mM, U-15N,13C,2D | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
5 | HNCO | 0.5mM, U-15N,13C,2D | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
6 | HN(CA)CO | 0.5mM, U-15N,13C,2D | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
7 | 15N-NOESY | 0.5mM, U-15N,13C | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
8 | TOCSY | 0.5mM, U-15N,13C | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
9 | 13C-NOESY | 0.5mM, U-15N,13C | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
10 | TOCSY | 0.5mM, U-15N,13C | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
11 | 2D NOESY | 0.5mM unlabeled | 100% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
12 | TOCSY | 0.5mM unlabeled | 100% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
13 | CCONH | 0.5mM, U-15N,13C | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 | |
14 | HCCONH | 0.5mM, U-15N,13C | 90% H2O/10% D2O | 17mM NaPO4, 50mM NaCl | 7.4 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | AVANCE | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | PROSA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (lowest energy,fewest violations,closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | PROSA | 3.7 | Guntert |
2 | data analysis | XEASY | 1.3.13 | Bartels |
3 | refinement | CYANA | 1.0.4 | Guntert |
4 | refinement | X-PLOR | 3.851 | Brunger |