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3D solution structure of the C-terminal cysteine-rich domain of the VHv1.1 polydnaviral gene product
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D TOCSY 1mM C-term VHv1.1, 25mM sodium phosphate, 100mM NaCl, 1mM EDTA, 0.01% sodium azide 95% H2O/5% D2O 100mM NaCl 5.7 ambient 315 2 2D NOESY 1mM C-term VHv1.1, 25mM sodium phosphate, 100mM NaCl, 1mM EDTA, 0.01% sodium azide 95% H2O/5% D2O 100mM NaCl 5.7 ambient 315 3 DQF-COSY 1mM C-term VHv1.1, 25mM sodium phosphate, 100mM NaCl, 1mM EDTA, 0.01% sodium azide 95% H2O/5% D2O 100mM NaCl 5.7 ambient 315
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 600
NMR Refinement Method Details Software torsion angle dynamics and simulated annealing protocols using CNS The structures are based on 280 NOE-derived interproton distance constraints, 24 distance restraints from 12 hydrogen bonds XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 25 Conformers Submitted Total Number 25 Representative Model 17 (lowest energy)
Additional NMR Experimental Information Details This ensemble of NMR structures was determined using standard 2D 1H homonuclear NMR techniques
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR 2.6 Bruker 2 structure solution CNS 1.0 Brunger 3 refinement CNS 1.0 Brunger