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Crystal Structures of Protein Kinase B Selective Inhibitors in Complex with Protein Kinase A and Mutants
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.4 278 LiCl, MesBisTris, methanol, MEGA-8, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 278K
Crystal Properties Matthews coefficient Solvent content 2.54 51.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.8 α = 90 b = 75.474 β = 90 c = 79.448 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2002-11-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 1.05 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.47 17.595 16311 16311
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.47 17.6 15488 822 99.4 0.19186 0.18868 0.25374 RANDOM 37.389
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.15 2.14 -0.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.54 r_scangle_it 2.864 r_scbond_it 1.725 r_angle_refined_deg 1.496 r_mcangle_it 1.26 r_angle_other_deg 0.845 r_mcbond_it 0.678 r_symmetry_hbond_refined 0.238 r_nbd_other 0.227 r_nbd_refined 0.195
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.54 r_scangle_it 2.864 r_scbond_it 1.725 r_angle_refined_deg 1.496 r_mcangle_it 1.26 r_angle_other_deg 0.845 r_mcbond_it 0.678 r_symmetry_hbond_refined 0.238 r_nbd_other 0.227 r_nbd_refined 0.195 r_symmetry_vdw_other 0.195 r_xyhbond_nbd_refined 0.15 r_symmetry_vdw_refined 0.112 r_nbtor_other 0.087 r_chiral_restr 0.084 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_gen_planes_other 0.003 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2914 Nucleic Acid Atoms Solvent Atoms 137 Heterogen Atoms 42
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing