1XH4

Crystal Structures of Protein Kinase B Selective Inhibitors in Complex with Protein Kinase A and Mutants


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.4278LiCl, MesBisTris, methanol, MEGA-8, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 278K
Crystal Properties
Matthews coefficientSolvent content
2.6453.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 73.013α = 90
b = 79.144β = 90
c = 79.643γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayIMAGE PLATEMARRESEARCH2002-05-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU300

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.4533.151727217272

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.4533.151641285998.610.19120.188630.24152RANDOM27.266
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.17-0.410.58
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.523
r_scangle_it3.296
r_scbond_it2.036
r_angle_refined_deg1.622
r_mcangle_it1.378
r_angle_other_deg0.919
r_mcbond_it0.747
r_symmetry_vdw_other0.272
r_nbd_other0.235
r_nbd_refined0.21
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.523
r_scangle_it3.296
r_scbond_it2.036
r_angle_refined_deg1.622
r_mcangle_it1.378
r_angle_other_deg0.919
r_mcbond_it0.747
r_symmetry_vdw_other0.272
r_nbd_other0.235
r_nbd_refined0.21
r_symmetry_hbond_refined0.178
r_xyhbond_nbd_refined0.149
r_chiral_restr0.099
r_nbtor_other0.088
r_symmetry_vdw_refined0.077
r_bond_refined_d0.019
r_gen_planes_refined0.006
r_bond_other_d0.002
r_gen_planes_other0.002
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2884
Nucleic Acid Atoms
Solvent Atoms115
Heterogen Atoms37

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
AMoREphasing