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High Resolution NMR Structure of the Wilms' Tumor Suppressor Protein (WT1) Finger 3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 DQF-COSY 5mM WT1-F3[EK] 90% H2O/10% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 2 2D NOESY 5mM WT1-F3[EK] 90% H2O/10% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 3 2D TOCSY 5mM WT1-F3[EK] 90% H2O/10% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 4 3D-TOCSY-NOESY 5mM WT1-F3[EK] 90% H2O/10% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 5 2D-ROESY 5mM WT1-F3[EK] 90% H2O/10% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 6 DQF-COSY 5mM WT1-F3[EK] 100% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 7 2D NOESY 5mM WT1-F3[EK] 100% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298 8 2D TOCSY 5mM WT1-F3[EK] 100% D2O 50mM D11-TRIS-HCL, 5.5mM ZnCl2 6.1 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian VXRS 500 2 Varian UNITYPLUS 500
NMR Refinement Method Details Software DISTANCE GEOMETRY/SIMULATED ANNEALING FOLLOWED BY RESTRAINED MOLECULAR DYNAMICS VNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 50 Conformers Submitted Total Number 40 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing VNMR 4.3-5.3 Varian, Inc. 2 structure solution DGII Standalone Havel, T.F. 3 refinement X-PLOR 3.1 Brunger, A.T.