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The Mono-Zinc Carbapenemase CphA (N220G mutant) Shows a Zn(II)- NH2 ARG Coordination
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 280 PEG, AS, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 280K
Crystal Properties Matthews coefficient Solvent content 2.5 51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.683 α = 90 b = 101.286 β = 90 c = 117.82 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-06-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM30A ESRF BM30A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 50 93.1 0.058 0.058 8.7 5.8 32222
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.69 93.1 0.07 0.07 8.1 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 1.6 50 30092 1598 92.72 0.153 0.15397 0.15259 0.1662 0.17957 0.1915 RANDOM 11.165
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.22 0.45 -0.23
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 8.379 r_dihedral_angle_1_deg 6.415 r_sphericity_bonded 4.173 r_scangle_it 3.357 r_scbond_it 2.076 r_angle_refined_deg 1.364 r_mcangle_it 1.299 r_angle_other_deg 1.042 r_mcbond_it 0.735 r_nbd_refined 0.413
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 8.379 r_dihedral_angle_1_deg 6.415 r_sphericity_bonded 4.173 r_scangle_it 3.357 r_scbond_it 2.076 r_angle_refined_deg 1.364 r_mcangle_it 1.299 r_angle_other_deg 1.042 r_mcbond_it 0.735 r_nbd_refined 0.413 r_symmetry_vdw_other 0.324 r_nbd_other 0.243 r_xyhbond_nbd_refined 0.173 r_symmetry_vdw_refined 0.105 r_symmetry_hbond_refined 0.104 r_chiral_restr 0.083 r_nbtor_other 0.081 r_metal_ion_refined 0.038 r_bond_refined_d 0.011 r_gen_planes_other 0.009 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1772 Nucleic Acid Atoms Solvent Atoms 258 Heterogen Atoms 32
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling CCP4 model building REFMAC refinement CCP4 data scaling CCP4 phasing