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Agrocybe cylindracea galectin complexed with NeuAca2-3lactose
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.1 293 ammomium sulfate, lactose, pipes, N-acetylneuraminyl lactose, pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.4 47.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.264 α = 89.98 b = 57.078 β = 111.73 c = 64.306 γ = 90.22
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 AREA DETECTOR SIEMENS HI-STAR carbon monochromater 2001-11-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE MACSCIENCE 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 23.9 95.3 0.063 17.65 2.94 28771 27431 1 14.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.38 91.9 0.258 3.6 1.27 2905
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 10 27405 25209 2494 91.9 0.215 0.215 0.2111 0.274 0.2668 RANDOM 28.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.54 1.08 -2.84 1.96 0.52 -7.5
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 27.8 c_scangle_it 2.66 c_mcangle_it 2.42 c_scbond_it 1.81 c_mcbond_it 1.42 c_angle_deg 1.3 c_improper_angle_d 0.72 c_bond_d 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4772 Nucleic Acid Atoms Solvent Atoms 345 Heterogen Atoms 172
Software Software Software Name Purpose CNS refinement SADIE data reduction SAINT data reduction SAINT data scaling CNS phasing