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Acyl Ureas as Human Liver Glycogen Phosphorylase Inhibitors for the Treatment of Type 2 Diabetes
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 SMALL TUBES 6.7 298 10mM Bes buffer, 3mM DDT, pH 6.7, SMALL TUBES, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.43 48.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 128.679 α = 90 b = 128.679 β = 90 c = 115.977 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE RIGAKU RAXIS IV 2000-10-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.26 29.5 95.7 0.063 15.6 5.5 394073 44163 21
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.26 2.3 88.6 0.248 5.9 5.4 2029
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.26 29.49 44138 2248 95.7 0.201 0.201 0.236 RANDOM 29
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 25.3 x_scangle_it 3.05 x_mcangle_it 2.15 x_scbond_it 1.88 x_angle_deg 1.4 x_mcbond_it 1.22 x_improper_angle_d 0.75 x_bond_d 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6634 Nucleic Acid Atoms Solvent Atoms 240 Heterogen Atoms 46
Software Software Software Name Purpose X-PLOR refinement HKL-2000 data reduction SCALEPACK data scaling X-PLOR phasing