☰ Navigation Tabs
Urate oxidase from aspergillus flavus complexed with 5-amino 6-nitro uracil
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8 291 8.5MG/ML PROTEIN, 0.2MG/ML DIAMINOURACIL, 5-7%(W/V) PEG 8000, 100MM TRIS/HCL, pH 8.00, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.8 55.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 80.385 α = 90 b = 96.469 β = 90 c = 106.131 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 283 IMAGE PLATE MARRESEARCH curvated mirrors 2003-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON LURE BEAMLINE DW32 0.972 LURE DW32
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.64 35 99.9 0.037 17.8 6 48554 28.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.64 1.68 100 0.285 10.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIR under pressure of noble gaz THROUGHOUT 1.64 28 45587 5098 0.1697 0.16798 0.18518 0.2113 RANDOM 21.976
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.5 -0.63 -0.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.562 r_dihedral_angle_3_deg 12.43 r_dihedral_angle_4_deg 9.961 r_scangle_it 6.834 r_dihedral_angle_1_deg 5.445 r_scbond_it 4.587 r_mcangle_it 2.062 r_mcbond_it 1.627 r_angle_refined_deg 1.407 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.562 r_dihedral_angle_3_deg 12.43 r_dihedral_angle_4_deg 9.961 r_scangle_it 6.834 r_dihedral_angle_1_deg 5.445 r_scbond_it 4.587 r_mcangle_it 2.062 r_mcbond_it 1.627 r_angle_refined_deg 1.407 r_nbtor_refined 0.306 r_nbd_refined 0.201 r_symmetry_hbond_refined 0.187 r_symmetry_vdw_refined 0.166 r_xyhbond_nbd_refined 0.131 r_chiral_restr 0.11 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2362 Nucleic Acid Atoms Solvent Atoms 215 Heterogen Atoms 12
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement SHARP phasing