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Solution structure of the KH domain of human ribosomal protein S3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 0.6mM KH domain U-15N, 13C; d-Tris-HCl(pH 7.0); 200mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O 90% H2O/10% D2O 220mM 7.0 ambient 296 2 3D_13C-separated_NOESY 0.6mM KH domain U-15N, 13C; d-Tris-HCl(pH 7.0); 200mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O 90% H2O/10% D2O 220mM 7.0 ambient 296
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, restrained molecular dynamics XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations, structures with the lowest energy, target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 2.6 Bruker 2 processing NMRPipe 20020425 Delaglio, F. 3 data analysis NMRView 5.0.4 Johnson, B.A. 4 data analysis KUJIRA 0.901 Kobayashi, N. 5 structure solution CYANA 1.0.7 Guentert, P. 6 refinement OPALp Koradi, R.,Billeter, M.,Guentert, P.