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The high resolution structure of methanol dehydrogenase from methylobacterium extorquens
Crystallization Crystal Properties Matthews coefficient Solvent content 2.51 38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.9 α = 86.09 b = 73.62 β = 104.11 c = 88.08 γ = 109.68
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 150 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.23 20 90.3 0.1 2.3 2 373341 1.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.2 10 353944 18605 85 0.1527 0.1576 0.1498 0.1769 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 11797.25
RMS Deviations Key Refinement Restraint Deviation s_anti_bump_dis_restr 0.127 s_zero_chiral_vol 0.074 s_approx_iso_adps 0.068 s_non_zero_chiral_vol 0.067 s_angle_d 0.046 s_similar_adp_cmpnt 0.042 s_from_restr_planes 0.0318 s_bond_d 0.022 s_rigid_bond_adp_cmpnt 0.005 s_similar_dist
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10340 Nucleic Acid Atoms Solvent Atoms 1437 Heterogen Atoms 68
Software Software Software Name Purpose SHELXL-97 refinement