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Deacetoxycephalosporin C synthase (with his-tag) complexed with Fe(II) and ethylene glycol
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 100 MM HEPES PH8, 0.9-1.1 M AMSO4, pH 8.00
Crystal Properties Matthews coefficient Solvent content 4.1 70
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 137.8 α = 90 b = 137.8 β = 90 c = 48.6 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 60 99.6 0.06 49 9 18252 77
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.59 98.9 0.6 3 8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.51 59.76 17248 919 99.5 0.229 0.228 0.2129 0.254 0.24 RANDOM 55.66
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.01 0.01 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.813 r_scangle_it 3.281 r_scbond_it 1.932 r_mcangle_it 1.802 r_angle_refined_deg 1.472 r_mcbond_it 0.961 r_angle_other_deg 0.849 r_symmetry_vdw_other 0.385 r_nbd_other 0.224 r_nbd_refined 0.216
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.813 r_scangle_it 3.281 r_scbond_it 1.932 r_mcangle_it 1.802 r_angle_refined_deg 1.472 r_mcbond_it 0.961 r_angle_other_deg 0.849 r_symmetry_vdw_other 0.385 r_nbd_other 0.224 r_nbd_refined 0.216 r_xyhbond_nbd_refined 0.207 r_symmetry_hbond_refined 0.149 r_nbtor_other 0.088 r_chiral_restr 0.082 r_symmetry_vdw_refined 0.075 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_gen_planes_other 0.004 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2135 Nucleic Acid Atoms Solvent Atoms 82 Heterogen Atoms 9
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling