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ASV INTEGRASE CORE DOMAIN WITH CD(II) COFACTORS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 PROTEIN WAS CRYSTALLIZED FROM 20% PEG 4000, N10% ISOPROPANOL, 100 MM HEPES, PH 7.5, THEN SOAKED IN 100 MM CDCL2.
Crystal Properties Matthews coefficient Solvent content 2.65 38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.33 α = 90 b = 66.33 β = 90 c = 80.92 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE MARRESEARCH MIRRORS 1996-10-11 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 15 92.1 0.122 5.6 4.8 10210
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.14 91.6 0.122 2.7 3.7
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION ISOSTRUCTURAL TO PDB ENTRY 1VSF 2.1 10 2 9751 92.1 0.175 0.1692
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 33.5 p_staggered_tor 17.2 p_scangle_it 7.478 p_scbond_it 5.286 p_mcangle_it 4.062 p_mcbond_it 2.547 p_planar_tor 2.4 p_xyhbond_nbd 0.264 p_multtor_nbd 0.237 p_singtor_nbd 0.203
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 33.5 p_staggered_tor 17.2 p_scangle_it 7.478 p_scbond_it 5.286 p_mcangle_it 4.062 p_mcbond_it 2.547 p_planar_tor 2.4 p_xyhbond_nbd 0.264 p_multtor_nbd 0.237 p_singtor_nbd 0.203 p_chiral_restr 0.176 p_planar_d 0.047 p_angle_d 0.041 p_plane_restr 0.016 p_bond_d 0.014 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1128 Nucleic Acid Atoms Solvent Atoms 117 Heterogen Atoms 17
Software Software Software Name Purpose PROFFT refinement DENZO data reduction SCALEPACK data scaling