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ASV INTEGRASE CORE DOMAIN WITH CA(II) COFACTOR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 PROTEIN WAS CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, 100 MM HEPES, PH 7.5, THEN SOAKED IN 100 MM CACL2.
Crystal Properties Matthews coefficient Solvent content 2.64 38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.15 α = 90 b = 66.15 β = 90 c = 80.96 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE RIGAKU RAXIS IIC MIRRORS 1996-09-08 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 15 95.5 0.11 9.1 4.1 9230
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.24 92.1 0.375 3.05 3.4
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION ISOSTRUCTURAL TO PDB ENTRY 1VSF 2.2 10 2 8866 95.5 0.171 0.1656
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 37.4 p_staggered_tor 19.2 p_scangle_it 8.101 p_scbond_it 5.673 p_mcangle_it 4.094 p_planar_tor 3 p_mcbond_it 2.634 p_multtor_nbd 0.22 p_xyhbond_nbd 0.22 p_singtor_nbd 0.214
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 37.4 p_staggered_tor 19.2 p_scangle_it 8.101 p_scbond_it 5.673 p_mcangle_it 4.094 p_planar_tor 3 p_mcbond_it 2.634 p_multtor_nbd 0.22 p_xyhbond_nbd 0.22 p_singtor_nbd 0.214 p_chiral_restr 0.159 p_planar_d 0.053 p_angle_d 0.046 p_plane_restr 0.018 p_bond_d 0.015 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1128 Nucleic Acid Atoms Solvent Atoms 99 Heterogen Atoms 16
Software Software Software Name Purpose PROFFT refinement DENZO data reduction SCALEPACK data scaling