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Crystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.5 277 35.0% MPD, 0.1M Acetate pH 4.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP
Crystal Properties Matthews coefficient Solvent content 2.41 48.58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.242 α = 90 b = 95.831 β = 95.43 c = 90.13 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2004-04-15 M MAD 2 1 3 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.898407, 0.979029 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 48.92 100 0.088 22.6 12.2 85995 31.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.85 99.9 0.41 3 6.6 6342
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.8 48.92 81663 4306 99.87 0.14858 0.14687 0.1603 0.18104 0.1919 RANDOM 25.636
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 -2.22 0.56 -0.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.695 r_dihedral_angle_4_deg 16.407 r_dihedral_angle_3_deg 12.474 r_scangle_it 7.601 r_dihedral_angle_1_deg 5.997 r_scbond_it 5.682 r_mcangle_it 3.174 r_mcbond_it 2.542 r_angle_refined_deg 1.553 r_angle_other_deg 0.807
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.695 r_dihedral_angle_4_deg 16.407 r_dihedral_angle_3_deg 12.474 r_scangle_it 7.601 r_dihedral_angle_1_deg 5.997 r_scbond_it 5.682 r_mcangle_it 3.174 r_mcbond_it 2.542 r_angle_refined_deg 1.553 r_angle_other_deg 0.807 r_mcbond_other 0.723 r_symmetry_vdw_other 0.284 r_nbd_refined 0.213 r_nbtor_refined 0.184 r_symmetry_vdw_refined 0.18 r_symmetry_hbond_refined 0.18 r_nbd_other 0.176 r_xyhbond_nbd_refined 0.154 r_chiral_restr 0.096 r_nbtor_other 0.084 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6341 Nucleic Acid Atoms Solvent Atoms 442 Heterogen Atoms 21
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SOLVE phasing REFMAC refinement CCP4 data scaling