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Crystal structure of an aig2-like protein (a2ld1, ggact, mgc7867) from mus musculus at 1.90 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION,SITTING DROP,NANODROP 293 4.1 Acetate, 2.4 NaFormate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.44 49.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 85.745 α = 90 b = 85.745 β = 90 c = 42.858 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2003-11-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 99.96 0.048 86.21 60.45 14364 26.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 99.93 0.122 27.43 0.78 2772
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 42.87 13625 720 99.99 0.13609 0.13416 0.1466 0.17058 0.1751 RANDOM 18.317
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.15 0.07 0.15 -0.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.633 r_dihedral_angle_4_deg 13.45 r_dihedral_angle_3_deg 11.468 r_scangle_it 6.652 r_dihedral_angle_1_deg 6.264 r_scbond_it 4.95 r_mcangle_it 3.168 r_mcbond_it 2.227 r_angle_refined_deg 1.605 r_angle_other_deg 0.941
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.633 r_dihedral_angle_4_deg 13.45 r_dihedral_angle_3_deg 11.468 r_scangle_it 6.652 r_dihedral_angle_1_deg 6.264 r_scbond_it 4.95 r_mcangle_it 3.168 r_mcbond_it 2.227 r_angle_refined_deg 1.605 r_angle_other_deg 0.941 r_mcbond_other 0.634 r_symmetry_hbond_refined 0.259 r_symmetry_vdw_other 0.237 r_nbd_refined 0.199 r_nbd_other 0.19 r_symmetry_vdw_refined 0.166 r_xyhbond_nbd_refined 0.156 r_chiral_restr 0.109 r_nbtor_other 0.084 r_bond_refined_d 0.015 r_bond_other_d 0.008 r_gen_planes_refined 0.008 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1188 Nucleic Acid Atoms Solvent Atoms 108 Heterogen Atoms 9
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELX model building autoSHARP phasing SOLOMON phasing REFMAC refinement SHELX phasing