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Crystal structure of putative NADPH-dependent oxidoreductase from Mus musculus at 2.10 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.1 277 0.1M Citrate pH 5.1, 0.2M NH4OAc, 15% PEG-4000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, pH 5.10
Crystal Properties Matthews coefficient Solvent content 2.6 51.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.386 α = 90 b = 91.805 β = 90 c = 100.565 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2003-05-09 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.97950, 0.9793, 0.9567 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 100.56 95.3 0.069 10.9 3.2 22460 41.59
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.15 74.9 0.431 1.7 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.1 50.28 21310 1123 94.9 0.182 0.18 0.1876 0.216 0.2279 RANDOM 19.61
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 -0.72 0.35
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.504 r_dihedral_angle_4_deg 21.759 r_dihedral_angle_3_deg 14.852 r_scangle_it 7.828 r_dihedral_angle_1_deg 6.66 r_scbond_it 6.205 r_mcangle_it 3.254 r_mcbond_it 2.368 r_angle_refined_deg 1.473 r_angle_other_deg 0.824
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.504 r_dihedral_angle_4_deg 21.759 r_dihedral_angle_3_deg 14.852 r_scangle_it 7.828 r_dihedral_angle_1_deg 6.66 r_scbond_it 6.205 r_mcangle_it 3.254 r_mcbond_it 2.368 r_angle_refined_deg 1.473 r_angle_other_deg 0.824 r_mcbond_other 0.533 r_symmetry_vdw_other 0.297 r_symmetry_hbond_refined 0.267 r_nbd_refined 0.201 r_nbd_other 0.185 r_symmetry_vdw_refined 0.149 r_xyhbond_nbd_refined 0.128 r_nbtor_other 0.089 r_chiral_restr 0.085 r_bond_refined_d 0.016 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2555 Nucleic Acid Atoms Solvent Atoms 153 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SOLVE phasing RESOLVE model building REFMAC refinement CCP4 data scaling RESOLVE phasing